Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10418 | Not Available | Negative | 1891111 - 1892067 | 31959.2 |
| oligopeptide transport system atp-binding protein | SAMN04488094_10419 | Not Available | Negative | 1892064 - 1893050 | 35613.8 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_10420 | Not Available | Negative | 1893047 - 1894102 | 38088.2 |
| peptide/nickel transport system permease protein | SAMN04488094_10421 | Not Available | Negative | 1894099 - 1895034 | 32936.6 |
| peptide/nickel transport system permease protein | SAMN04488094_10422 | Not Available | Negative | 1895045 - 1895965 | 33830.5 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_10423 | Not Available | Negative | 1896021 - 1897559 | 56506.2 |
| transcriptional regulator, rpir family | SAMN04488094_10424 | Not Available | Positive | 1897696 - 1898610 | 34258.7 |
| o-succinylbenzoate synthase | SAMN04488094_10425 | Not Available | Positive | 1898640 - 1899734 | 39923.0 |
| hypothetical protein | SAMN04488094_10426 | Not Available | Negative | 1900037 - 1900582 | 20517.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488094_10427 | Not Available | Negative | 1900851 - 1902098 | 45164.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
