Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_103304 | Not Available | Positive | 1830007 - 1830747 | 25398.3 |
| trans-feruloyl-coa synthase | SAMN04488094_103305 | Not Available | Positive | 1830747 - 1832603 | 67565.7 |
| predicted arabinose efflux permease, mfs family | SAMN04488094_103306 | Not Available | Positive | 1832590 - 1833783 | 40461.8 |
| nadh:flavin oxidoreductase / nadh oxidase family protein | SAMN04488094_103307 | Not Available | Negative | 1833780 - 1834631 | 30478.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488094_103308 | Not Available | Negative | 1834957 - 1835697 | 25023.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_103309 | Not Available | Negative | 1835699 - 1836601 | 31598.8 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN04488094_103310 | Not Available | Positive | 1836808 - 1837593 | 27682.6 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_103311 | Not Available | Positive | 1837618 - 1838169 | 20877.0 |
| trap transporter, dctm subunit | SAMN04488094_103312 | Not Available | Positive | 1838192 - 1839505 | 45893.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488094_103313 | Not Available | Positive | 1839495 - 1840469 | 34716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
