Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04488094_103264 | Not Available | Positive | 1789668 - 1791194 | 53621.7 |
| acyl-coa synthetase (ndp forming) | SAMN04488094_103265 | Not Available | Positive | 1791237 - 1793357 | 73665.5 |
| acyl-coa thioester hydrolase | SAMN04488094_103266 | Not Available | Negative | 1793380 - 1793832 | 16855.1 |
| glutathione s-transferase | SAMN04488094_103267 | Not Available | Negative | 1793829 - 1794854 | 37781.5 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04488094_103268 | Not Available | Negative | 1794859 - 1796064 | 42334.2 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_103269 | Not Available | Negative | 1796061 - 1796897 | 29428.2 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_103270 | Not Available | Negative | 1796885 - 1797700 | 29559.6 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04488094_103271 | Not Available | Negative | 1797697 - 1798791 | 40221.6 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04488094_103272 | Not Available | Negative | 1798794 - 1799846 | 38412.0 |
| acyl-coa dehydrogenase | SAMN04488094_103273 | Not Available | Positive | 1800067 - 1801194 | 39522.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
