Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, torcad operon response regulator torr | SAMN04488094_103254 | Not Available | Positive | 1780871 - 1781632 | 28006.8 |
| hypothetical protein | SAMN04488094_103255 | Not Available | Negative | 1781722 - 1782402 | 24599.0 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN04488094_103256 | Not Available | Negative | 1782450 - 1783367 | 34017.5 |
| cold-shock dna-binding protein family | SAMN04488094_103257 | Not Available | Negative | 1783543 - 1783749 | 7188.36 |
| putative transposase | SAMN04488094_103258 | Not Available | Positive | 1784249 - 1784407 | 6167.55 |
| enoyl-coa hydratase/carnithine racemase | SAMN04488094_103259 | Not Available | Negative | 1785016 - 1785786 | 27208.3 |
| enoyl-coa hydratase/carnithine racemase | SAMN04488094_103260 | Not Available | Negative | 1785790 - 1786590 | 28931.8 |
| nadph2:quinone reductase | SAMN04488094_103261 | Not Available | Negative | 1786587 - 1787603 | 34755.2 |
| enoyl-coa hydratase/carnithine racemase | SAMN04488094_103262 | Not Available | Negative | 1787600 - 1788421 | 30471.5 |
| nitronate monooxygenase | SAMN04488094_103263 | Not Available | Positive | 1788640 - 1789647 | 35441.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
