Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoyl-l-amino-acid hydrolase | SAMN04488094_103234 | Not Available | Positive | 1751161 - 1752444 | 45437.5 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488094_103235 | Not Available | Positive | 1752441 - 1753430 | 34477.6 |
| 2-keto-4-pentenoate hydratase | SAMN04488094_103236 | Not Available | Negative | 1753571 - 1754323 | 26526.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_103237 | Not Available | Negative | 1754353 - 1755063 | 24539.6 |
| trap transporter, 4tm/12tm fusion protein | SAMN04488094_103238 | Not Available | Negative | 1755232 - 1757109 | 66657.9 |
| hypothetical protein | SAMN04488094_103239 | Not Available | Negative | 1757191 - 1758186 | 35271.9 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN04488094_103240 | Not Available | Positive | 1758906 - 1759955 | 35443.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04488094_103241 | Not Available | Negative | 1760036 - 1761016 | 34479.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488094_103242 | Not Available | Negative | 1761081 - 1761962 | 31814.0 |
| alcohol dehydrogenase, class iv | SAMN04488094_103243 | Not Available | Positive | 1762674 - 1763789 | 38929.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
