Tropicimonas isoalkanivorans strain DSM 19548

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tropicimonas

Description

Tropicimonas isoalkanivorans strain DSM 19548 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature environments. It possesses a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number FOLG00000000.1, which facilitates its identification and classification in microbial databases. Its aerobic nature suggests that it relies on oxygen for metabolic processes, which is a key characteristic for understanding its ecological role. In a broader biological context, the characteristics of Tropicimonas isoalkanivorans, particularly its mesophilic nature and aerobic metabolism, may imply its adaptation to specific environmental niches where oxygen is available, such as soil or aquatic ecosystems. The ability to thrive at 37°C could also indicate its potential interactions with other organisms in warmer habitats, possibly influencing nutrient cycling and energy flow within those environments. Further research into its ecological role could provide insights into its contributions to microbial communities and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTropicimonas
SpeciesTropicimonas isoalkanivorans
Strainstrain DSM 19548

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicimonas isoalkanivorans strain DSM 19548 genome assembly,

Gene Summary

Adenine Count

883330 bp

Thymine Count

875776 bp

Guanine Count

1590237 bp

Cytosine Count

1626123 bp

Genome Length

4976641 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-carbamoyl-l-amino-acid hydrolaseSAMN04488094_103234Not AvailablePositive1751161 - 175244445437.5
d-3-phosphoglycerate dehydrogenaseSAMN04488094_103235Not AvailablePositive1752441 - 175343034477.6
2-keto-4-pentenoate hydrataseSAMN04488094_103236Not AvailableNegative1753571 - 175432326526.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04488094_103237Not AvailableNegative1754353 - 175506324539.6
trap transporter, 4tm/12tm fusion proteinSAMN04488094_103238Not AvailableNegative1755232 - 175710966657.9
hypothetical proteinSAMN04488094_103239Not AvailableNegative1757191 - 175818635271.9
uncharacterized conserved protein ygbk, duf1537 familySAMN04488094_103240Not AvailablePositive1758906 - 175995535443.8
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN04488094_103241Not AvailableNegative1760036 - 176101634479.1
4-hydroxy-tetrahydrodipicolinate synthaseSAMN04488094_103242Not AvailableNegative1761081 - 176196231814.0
alcohol dehydrogenase, class ivSAMN04488094_103243Not AvailablePositive1762674 - 176378938929.9

Displaying genes 1771 – 1780 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.