Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488094_103224 | Not Available | Negative | 1741470 - 1742396 | 32343.2 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_103225 | Not Available | Negative | 1742459 - 1743280 | 29168.6 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_103226 | Not Available | Negative | 1743277 - 1744164 | 31594.8 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04488094_103227 | Not Available | Negative | 1744157 - 1745293 | 40595.1 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04488094_103228 | Not Available | Negative | 1745302 - 1746381 | 39481.4 |
| xaa-pro dipeptidase | SAMN04488094_103229 | Not Available | Negative | 1746438 - 1747592 | 41366.6 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN04488094_103230 | Not Available | Negative | 1747787 - 1748869 | 37910.6 |
| sensor histidine kinase inhibitor, kipi family | SAMN04488094_103231 | Not Available | Negative | 1748866 - 1749510 | 22910.6 |
| dna-binding transcriptional regulator, gntr family | SAMN04488094_103232 | Not Available | Positive | 1749630 - 1750298 | 24906.9 |
| upf0271 protein | SAMN04488094_103233 | Not Available | Negative | 1750295 - 1751068 | 26805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
