Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488094_103214 | Not Available | Positive | 1730933 - 1731628 | 25612.8 |
| hybrid cluster protein-associated redox disulfide domain-containing protein | SAMN04488094_103215 | Not Available | Negative | 1731644 - 1731856 | 7839.46 |
| thiamine biosynthesis lipoprotein | SAMN04488094_103216 | Not Available | Negative | 1731910 - 1732815 | 32242.8 |
| copper chaperone nosl | SAMN04488094_103217 | Not Available | Negative | 1732815 - 1733345 | 18890.2 |
| cu-processing system permease protein | SAMN04488094_103218 | Not Available | Negative | 1733342 - 1734169 | 28631.6 |
| cu-processing system atp-binding protein | SAMN04488094_103219 | Not Available | Negative | 1734166 - 1735077 | 32374.9 |
| nitrous oxidase accessory protein | SAMN04488094_103220 | Not Available | Negative | 1735074 - 1736330 | 45100.4 |
| nitrous-oxide reductase | SAMN04488094_103221 | Not Available | Negative | 1736346 - 1738247 | 69383.7 |
| nosr/niri family transcriptional regulator, nitrous oxide reductase regulator | SAMN04488094_103222 | Not Available | Negative | 1738240 - 1740438 | 79668.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488094_103223 | Not Available | Negative | 1740700 - 1741470 | 25705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
