Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_103204 | Not Available | Positive | 1709022 - 1710839 | 68904.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488094_103205 | Not Available | Negative | 1711101 - 1712090 | 34803.9 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN04488094_103206 | Not Available | Negative | 1712527 - 1715685 | 111680.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488094_103207 | Not Available | Negative | 1715689 - 1716888 | 41393.7 |
| hypothetical protein | SAMN04488094_103208 | Not Available | Negative | 1716974 - 1725814 | 285013.0 |
| two component transcriptional regulator, lyttr family | SAMN04488094_103209 | Not Available | Negative | 1725959 - 1726690 | 26032.7 |
| histidine kinase | SAMN04488094_103210 | Not Available | Negative | 1726678 - 1727820 | 42592.2 |
| sh3 domain-containing protein | SAMN04488094_103211 | Not Available | Positive | 1728370 - 1729020 | 22176.3 |
| uncharacterized protein involved in response to no | SAMN04488094_103212 | Not Available | Negative | 1729130 - 1730332 | 43196.2 |
| pseudoazurin | SAMN04488094_103213 | Not Available | Negative | 1730404 - 1730832 | 14898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
