Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488094_103194 | Not Available | Negative | 1697600 - 1698724 | 39769.8 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488094_103195 | Not Available | Negative | 1698802 - 1699752 | 33418.6 |
| transcriptional regulator, laci family | SAMN04488094_103196 | Not Available | Positive | 1699942 - 1700940 | 36097.3 |
| predicted dehydrogenase | SAMN04488094_103197 | Not Available | Negative | 1700950 - 1702083 | 40889.3 |
| 2-keto-myo-inositol dehydratase | SAMN04488094_103198 | Not Available | Negative | 1702097 - 1702990 | 32857.7 |
| predicted dehydrogenase | SAMN04488094_103199 | Not Available | Negative | 1703003 - 1704115 | 40048.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN04488094_103200 | Not Available | Positive | 1704241 - 1706106 | 67315.4 |
| 5-dehydro-2-deoxygluconokinase | SAMN04488094_103201 | Not Available | Positive | 1706106 - 1707089 | 34766.1 |
| 5-deoxy-glucuronate isomerase | SAMN04488094_103202 | Not Available | Positive | 1707113 - 1707955 | 31174.8 |
| fructose-bisphosphate aldolase, class ii | SAMN04488094_103203 | Not Available | Positive | 1707952 - 1708791 | 29546.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
