Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_103174 | Not Available | Negative | 1674989 - 1675156 | 5962.85 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04488094_103175 | Not Available | Negative | 1675156 - 1676325 | 41183.1 |
| glutaryl-coa dehydrogenase | SAMN04488094_103176 | Not Available | Negative | 1676337 - 1677536 | 43422.3 |
| spermidine/putrescine transport system permease protein | SAMN04488094_103177 | Not Available | Negative | 1677713 - 1678564 | 30996.7 |
| spermidine/putrescine transport system permease protein | SAMN04488094_103178 | Not Available | Negative | 1678575 - 1679432 | 31761.1 |
| spermidine/putrescine transport system atp-binding protein | SAMN04488094_103179 | Not Available | Negative | 1679432 - 1680529 | 39905.0 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04488094_103180 | Not Available | Negative | 1680588 - 1681658 | 38163.0 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN04488094_103181 | Not Available | Negative | 1681935 - 1682993 | 38392.4 |
| transcriptional regulator, iclr family | SAMN04488094_103182 | Not Available | Negative | 1683007 - 1683798 | 28192.8 |
| multiple sugar transport system substrate-binding protein | SAMN04488094_103183 | Not Available | Positive | 1683952 - 1685184 | 45163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
