Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit h | SAMN04488094_103154 | Not Available | Positive | 1650591 - 1651496 | 32975.1 |
| nadh-quinone oxidoreductase subunit b | SAMN04488094_103155 | Not Available | Positive | 1651501 - 1652193 | 26533.1 |
| nadh dehydrogenase subunit c | SAMN04488094_103156 | Not Available | Positive | 1652193 - 1652729 | 20732.9 |
| nadh-quinone oxidoreductase subunit d | SAMN04488094_103157 | Not Available | Positive | 1652731 - 1653909 | 44092.2 |
| glutamate synthase (nadph/nadh) small chain | SAMN04488094_103158 | Not Available | Positive | 1653913 - 1655709 | 66017.6 |
| rubrerythrin | SAMN04488094_103159 | Not Available | Positive | 1655706 - 1656200 | 18349.8 |
| long-chain fatty acid transport protein | SAMN04488094_103160 | Not Available | Positive | 1656623 - 1657909 | 45862.2 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_103161 | Not Available | Positive | 1658102 - 1659463 | 47420.9 |
| transcriptional regulator, tetr family | SAMN04488094_103162 | Not Available | Negative | 1659522 - 1660178 | 24231.3 |
| membrane fusion protein, multidrug efflux system | SAMN04488094_103163 | Not Available | Positive | 1660296 - 1661453 | 40694.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
