Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN04488094_103134 | Not Available | Negative | 1634158 - 1634955 | 28476.9 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_103135 | Not Available | Negative | 1634952 - 1635905 | 34225.7 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04488094_103136 | Not Available | Negative | 1636038 - 1637135 | 40090.3 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04488094_103137 | Not Available | Negative | 1637172 - 1638305 | 41172.6 |
| gluconate 5-dehydrogenase | SAMN04488094_103138 | Not Available | Negative | 1638421 - 1639236 | 28635.4 |
| histidinol-phosphate aminotransferase | SAMN04488094_103139 | Not Available | Positive | 1639278 - 1640387 | 39839.1 |
| gntr family transcriptional regulator, histidine utilization repressor | SAMN04488094_103140 | Not Available | Negative | 1640457 - 1641209 | 27595.1 |
| fad binding domain-containing protein | SAMN04488094_103141 | Not Available | Negative | 1641327 - 1642271 | 33785.9 |
| fad binding domain-containing protein | SAMN04488094_103142 | Not Available | Negative | 1642302 - 1642502 | 6937.51 |
| putative flavoprotein involved in k+ transport | SAMN04488094_103143 | Not Available | Negative | 1642518 - 1643015 | 17582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
