Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-) | SAMN04488094_103124 | Not Available | Negative | 1622737 - 1623495 | 27173.6 |
| branched-chain amino acid transport system permease protein | SAMN04488094_103125 | Not Available | Negative | 1623492 - 1624490 | 35311.0 |
| branched-chain amino acid transport system permease protein | SAMN04488094_103126 | Not Available | Negative | 1624483 - 1625397 | 32595.1 |
| branched-chain amino acid transport system substrate-binding protein | SAMN04488094_103127 | Not Available | Negative | 1625498 - 1626616 | 40521.4 |
| l-2-amino-thiazoline-4-carboxylic acid hydrolase | SAMN04488094_103128 | Not Available | Negative | 1626695 - 1627201 | 18636.2 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488094_103129 | Not Available | Negative | 1627290 - 1628975 | 60932.3 |
| fmn-dependent dehydrogenase, includes l-lactate dehydrogenase and type ii isopentenyl diphosphate isomerase | SAMN04488094_103130 | Not Available | Negative | 1629302 - 1630465 | 42595.9 |
| hypothetical protein | SAMN04488094_103131 | Not Available | Negative | 1630478 - 1631776 | 48023.9 |
| (r,r)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase | SAMN04488094_103132 | Not Available | Negative | 1631778 - 1632776 | 34357.4 |
| histidinol dehydrogenase | SAMN04488094_103133 | Not Available | Negative | 1632780 - 1634105 | 46944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
