Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system permease protein | SAMN04488094_103114 | Not Available | Positive | 1613844 - 1614623 | 28239.3 |
| spermidine/putrescine transport system atp-binding protein | SAMN04488094_103115 | Not Available | Positive | 1614620 - 1615675 | 38205.0 |
| cytosine deaminase | SAMN04488094_103116 | Not Available | Positive | 1615686 - 1616930 | 44240.3 |
| l-amino acid n-acyltransferase ynca | SAMN04488094_103117 | Not Available | Negative | 1616945 - 1617493 | 19950.8 |
| putative membrane protein | SAMN04488094_103118 | Not Available | Positive | 1617679 - 1618308 | 23045.7 |
| hippurate hydrolase | SAMN04488094_103119 | Not Available | Negative | 1618388 - 1619557 | 41345.9 |
| l-2-amino-thiazoline-4-carboxylic acid hydrolase | SAMN04488094_103120 | Not Available | Negative | 1619561 - 1620028 | 17793.3 |
| glycine/d-amino acid oxidase | SAMN04488094_103121 | Not Available | Negative | 1620093 - 1621397 | 47063.2 |
| transcriptional regulator, asnc family | SAMN04488094_103122 | Not Available | Positive | 1621510 - 1622007 | 18759.8 |
| branched-chain amino acid transport system atp-binding protein | SAMN04488094_103123 | Not Available | Negative | 1622033 - 1622740 | 25284.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
