Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system atp-binding protein | SAMN04488094_103104 | Not Available | Positive | 1604794 - 1605588 | 28889.9 |
| 3-hydroxybutyrate dehydrogenase | SAMN04488094_103105 | Not Available | Positive | 1605585 - 1606358 | 26772.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488094_103106 | Not Available | Positive | 1606355 - 1607086 | 25580.6 |
| guanidinopropionase | SAMN04488094_103107 | Not Available | Positive | 1607102 - 1608073 | 34841.3 |
| creatinase | SAMN04488094_103108 | Not Available | Negative | 1608070 - 1609272 | 44381.5 |
| adenine phosphoribosyltransferase | SAMN04488094_103109 | Not Available | Negative | 1609302 - 1609943 | 23342.9 |
| predicted tim-barrel enzyme | SAMN04488094_103110 | Not Available | Negative | 1609940 - 1610686 | 26643.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_103111 | Not Available | Positive | 1610768 - 1611655 | 32224.3 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04488094_103112 | Not Available | Positive | 1611802 - 1612929 | 41786.1 |
| spermidine/putrescine transport system permease protein | SAMN04488094_103113 | Not Available | Positive | 1612998 - 1613840 | 31303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
