Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SAMN04488094_10374 | Not Available | Negative | 1572954 - 1573790 | 31317.4 |
| hydroxymethylglutaryl-coa lyase | SAMN04488094_10375 | Not Available | Negative | 1573787 - 1574728 | 33550.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_10376 | Not Available | Positive | 1574858 - 1575769 | 33078.5 |
| predicted dehydrogenase | SAMN04488094_10377 | Not Available | Negative | 1575806 - 1576864 | 37251.3 |
| dna-binding transcriptional regulator, gntr family | SAMN04488094_10378 | Not Available | Negative | 1576958 - 1577605 | 23472.1 |
| dna-binding transcriptional regulator, gntr family | SAMN04488094_10379 | Not Available | Positive | 1577739 - 1578395 | 25148.1 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN04488094_10380 | Not Available | Positive | 1578578 - 1579588 | 37039.8 |
| c4-dicarboxylate transporter, dctq subunit | SAMN04488094_10381 | Not Available | Positive | 1579621 - 1580217 | 22750.9 |
| trap transporter, dctm subunit | SAMN04488094_10382 | Not Available | Positive | 1580214 - 1581509 | 45479.9 |
| shikimate dehydrogenase | SAMN04488094_10383 | Not Available | Positive | 1581531 - 1582370 | 29604.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
