Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| positive regulator of sigma(e), rsec/mucc | SAMN04488094_10354 | Not Available | Negative | 1550576 - 1551046 | 15962.5 |
| 4fe-4s dicluster domain-containing protein | SAMN04488094_10355 | Not Available | Negative | 1551043 - 1551240 | 6881.38 |
| ferredoxin | SAMN04488094_10356 | Not Available | Negative | 1551349 - 1551636 | 10230.3 |
| flavorubredoxin | SAMN04488094_10357 | Not Available | Negative | 1551668 - 1552975 | 48143.4 |
| electron transport complex protein rnfa | SAMN04488094_10358 | Not Available | Positive | 1553476 - 1554057 | 20444.0 |
| electron transport complex protein rnfb | SAMN04488094_10359 | Not Available | Positive | 1554075 - 1554632 | 19031.1 |
| electron transport complex protein rnfc | SAMN04488094_10360 | Not Available | Positive | 1554645 - 1556192 | 55298.9 |
| electron transport complex protein rnfd | SAMN04488094_10361 | Not Available | Positive | 1556189 - 1557271 | 37405.6 |
| electron transport complex protein rnfg | SAMN04488094_10362 | Not Available | Positive | 1557268 - 1557987 | 25338.8 |
| electron transport complex protein rnfe | SAMN04488094_10363 | Not Available | Positive | 1557987 - 1558718 | 25284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
