Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogenase-stabilizing/protective protein | SAMN04488094_10344 | Not Available | Positive | 1543138 - 1543485 | 13163.8 |
| molybdate transport system substrate-binding protein | SAMN04488094_10345 | Not Available | Positive | 1543510 - 1544298 | 26565.6 |
| molybdate transport system permease protein | SAMN04488094_10346 | Not Available | Positive | 1544295 - 1544990 | 24258.5 |
| molybdate transport system atp-binding protein | SAMN04488094_10347 | Not Available | Positive | 1544987 - 1545685 | 24707.1 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN04488094_10348 | Not Available | Positive | 1545721 - 1546998 | 46428.6 |
| ferredoxin | SAMN04488094_10349 | Not Available | Positive | 1547214 - 1547582 | 13675.5 |
| peroxiredoxin | SAMN04488094_10350 | Not Available | Positive | 1547652 - 1548191 | 19750.4 |
| pyridine nucleotide-disulphide oxidoreductase | SAMN04488094_10351 | Not Available | Negative | 1548280 - 1549308 | 35328.4 |
| hypothetical protein | SAMN04488094_10352 | Not Available | Negative | 1549318 - 1549485 | 5538.64 |
| thiamine biosynthesis lipoprotein | SAMN04488094_10353 | Not Available | Negative | 1549482 - 1550579 | 38498.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
