Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10334 | Not Available | Positive | 1536600 - 1536743 | 5234.63 |
| hypothetical protein | SAMN04488094_10335 | Not Available | Positive | 1536740 - 1536946 | 7675.26 |
| ferredoxin iii, nif-specific | SAMN04488094_10336 | Not Available | Positive | 1536950 - 1537246 | 10754.9 |
| nitrogen fixation protein nifq | SAMN04488094_10337 | Not Available | Positive | 1537230 - 1537778 | 20374.3 |
| hypothetical protein | SAMN04488094_10338 | Not Available | Positive | 1537926 - 1538402 | 17298.4 |
| iron-sulfur cluster assembly accessory protein | SAMN04488094_10339 | Not Available | Positive | 1538615 - 1538935 | 11097.0 |
| nifu-like protein | SAMN04488094_10340 | Not Available | Positive | 1538948 - 1539982 | 36038.2 |
| cysteine desulfurase | SAMN04488094_10341 | Not Available | Positive | 1539993 - 1541198 | 43498.8 |
| homocitrate synthase nifv | SAMN04488094_10342 | Not Available | Positive | 1541209 - 1542399 | 40873.0 |
| serine o-acetyltransferase | SAMN04488094_10343 | Not Available | Positive | 1542396 - 1543109 | 24902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
