Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2-like domain-containing protein | SAMN04488094_10324 | Not Available | Positive | 1525969 - 1526796 | 30100.8 |
| hypothetical protein | SAMN04488094_10325 | Not Available | Positive | 1526811 - 1527212 | 14801.2 |
| mo-nitrogenase iron protein subunit nifh | SAMN04488094_10326 | Not Available | Positive | 1527405 - 1528289 | 31679.1 |
| mo-nitrogenase mofe protein subunit nifd precursor | SAMN04488094_10327 | Not Available | Positive | 1528360 - 1529859 | 55565.9 |
| mo-nitrogenase mofe protein subunit nifk | SAMN04488094_10328 | Not Available | Positive | 1529992 - 1531536 | 57241.9 |
| hypothetical protein | SAMN04488094_10329 | Not Available | Positive | 1531796 - 1532536 | 26991.0 |
| nitrogenase molybdenum-cofactor synthesis protein nife | SAMN04488094_10330 | Not Available | Positive | 1532712 - 1534277 | 56394.3 |
| nitrogenase molybdenum-iron protein nifn | SAMN04488094_10331 | Not Available | Positive | 1534279 - 1535670 | 49380.2 |
| nitrogen fixation protein nifx | SAMN04488094_10332 | Not Available | Positive | 1535645 - 1536133 | 17410.8 |
| probable nitrogen fixation protein | SAMN04488094_10333 | Not Available | Positive | 1536130 - 1536600 | 17353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
