Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin hydrogenase gamma subunit | SAMN04488094_10314 | Not Available | Positive | 1515366 - 1517222 | 68344.0 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN04488094_10315 | Not Available | Positive | 1517323 - 1517844 | 19001.9 |
| trap transporter, dctm subunit | SAMN04488094_10316 | Not Available | Positive | 1517837 - 1519453 | 56224.7 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN04488094_10317 | Not Available | Positive | 1519502 - 1520566 | 37772.9 |
| nif-specific regulatory protein | SAMN04488094_10318 | Not Available | Positive | 1520989 - 1522740 | 63803.0 |
| nitrogen fixation protein nifb | SAMN04488094_10319 | Not Available | Positive | 1522993 - 1524480 | 54013.1 |
| 4fe-4s dicluster domain-containing protein | SAMN04488094_10320 | Not Available | Positive | 1524508 - 1524702 | 6845.99 |
| leucine rich repeat variant | SAMN04488094_10321 | Not Available | Positive | 1524707 - 1525474 | 29268.2 |
| nitrogen fixation protein nifz | SAMN04488094_10322 | Not Available | Positive | 1525461 - 1525754 | 11015.2 |
| nitrogen fixation protein nift | SAMN04488094_10323 | Not Available | Positive | 1525751 - 1525963 | 7939.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
