Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | SAMN04488094_1034 | Not Available | Positive | 1504576 - 1505604 | 36378.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_1035 | Not Available | Positive | 1505635 - 1506387 | 25860.1 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04488094_1036 | Not Available | Positive | 1506491 - 1507462 | 34075.4 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_1037 | Not Available | Positive | 1507459 - 1508031 | 20459.4 |
| trap transporter, dctm subunit | SAMN04488094_1038 | Not Available | Positive | 1508044 - 1509300 | 44256.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_1039 | Not Available | Negative | 1509294 - 1510310 | 38513.2 |
| nitt/taut family transport system substrate-binding protein | SAMN04488094_10310 | Not Available | Positive | 1510546 - 1511559 | 35704.7 |
| nitt/taut family transport system permease protein | SAMN04488094_10311 | Not Available | Positive | 1511564 - 1512343 | 26912.3 |
| nitt/taut family transport system atp-binding protein | SAMN04488094_10312 | Not Available | Positive | 1512340 - 1513074 | 25859.2 |
| formate dehydrogenase beta subunit | SAMN04488094_10313 | Not Available | Positive | 1513367 - 1515364 | 72870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
