Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMN04488094_102611 | Not Available | Positive | 1484910 - 1485509 | 21325.2 |
| cold shock protein (beta-ribbon, cspa family) | SAMN04488094_102612 | Not Available | Positive | 1485679 - 1485885 | 7336.71 |
| hypothetical protein | SAMN04488094_102613 | Not Available | Positive | 1486094 - 1486393 | 11026.2 |
| arsenate reductase, glutaredoxin family | SAMN04488094_102614 | Not Available | Negative | 1486706 - 1487032 | 12084.5 |
| uncharacterized membrane protein | SAMN04488094_102615 | Not Available | Negative | 1487094 - 1487492 | 14326.8 |
| transcriptional regulator, trar/dksa family | SAMN04488094_102616 | Not Available | Negative | 1487542 - 1487874 | 12012.2 |
| protein of unknown function | SAMN04488094_102617 | Not Available | Negative | 1488096 - 1489472 | 50657.8 |
| hypothetical protein | SAMN04488094_102618 | Not Available | Negative | 1489472 - 1490497 | 36506.7 |
| thymidylate synthase (fad) | SAMN04488094_102619 | Not Available | Positive | 1490694 - 1491605 | 34488.0 |
| lactoylglutathione lyase | SAMN04488094_102620 | Not Available | Positive | 1491685 - 1492116 | 16373.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
