Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 2162596 - 2162610 | Not Available |
| hypothetical protein | SAMN04488094_10540 | Not Available | Positive | 2162828 - 2163070 | 9331.87 |
| Hypothetical protein | SAMN04488094_10541 | Not Available | Positive | 2163070 - 2164656 | 54403.5 |
| Attl | Not Available | Not Available | Positive | 3426978 - 3426990 | Not Available |
| Site-specific recombinase for integration and excision | SAMN04488094_11125 | Not Available | Negative | 3427158 - 3428468 | 48471.1 |
| protein of unknown function | SAMN04488094_11126 | Not Available | Negative | 3428465 - 3428920 | 17398.9 |
| hypothetical protein | SAMN04488094_11127 | Not Available | Positive | 3429219 - 3430499 | 48107.5 |
| hypothetical protein | SAMN04488094_11128 | Not Available | Positive | 3430459 - 3431409 | 33702.6 |
| hnh endonuclease | SAMN04488094_11129 | Not Available | Negative | 3431425 - 3432225 | 29800.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488094_11130 | Not Available | Positive | 3432584 - 3433177 | 21506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
