Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102571 | Not Available | Positive | 1434701 - 1435063 | 12789.1 |
| hypothetical protein | SAMN04488094_102572 | Not Available | Negative | 1435318 - 1435911 | 20671.3 |
| putative abc transport system atp-binding protein | SAMN04488094_102573 | Not Available | Positive | 1436275 - 1437003 | 25984.2 |
| putative abc transport system permease protein | SAMN04488094_102574 | Not Available | Positive | 1436997 - 1439372 | 84066.0 |
| hlyd family secretion protein | SAMN04488094_102575 | Not Available | Positive | 1439380 - 1440612 | 43791.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488094_102576 | Not Available | Negative | 1440628 - 1441056 | 15763.8 |
| trap transporter, 4tm/12tm fusion protein | SAMN04488094_102577 | Not Available | Negative | 1441068 - 1443695 | 94001.6 |
| hypothetical protein | SAMN04488094_102578 | Not Available | Negative | 1443783 - 1444745 | 34119.4 |
| multisubunit potassium/proton antiporter, phaa subunit /multisubunit potassium/proton antiporter, phab subunit | SAMN04488094_102579 | Not Available | Positive | 1445470 - 1448337 | 103297.0 |
| multicomponent k+:h+ antiporter subunit c | SAMN04488094_102580 | Not Available | Positive | 1448339 - 1448755 | 14955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
