Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04488094_102561 | Not Available | Negative | 1427561 - 1428013 | 15154.7 |
| nadh:ubiquinone oxidoreductase subunit | SAMN04488094_102562 | Not Available | Negative | 1428067 - 1428453 | 15082.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488094_102563 | Not Available | Negative | 1428644 - 1429027 | 13628.2 |
| transcriptional regulator, lysr family | SAMN04488094_102564 | Not Available | Negative | 1429160 - 1430095 | 33813.1 |
| hypothetical protein | SAMN04488094_102565 | Not Available | Positive | 1430347 - 1430574 | 8739.63 |
| hypothetical protein | SAMN04488094_102566 | Not Available | Positive | 1430629 - 1430877 | 9064.45 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04488094_102567 | Not Available | Negative | 1430928 - 1432190 | 45834.8 |
| atp-dependent clp protease, protease subunit | SAMN04488094_102568 | Not Available | Negative | 1432370 - 1433002 | 23353.2 |
| uncharacterized conserved protein, duf2267 family | SAMN04488094_102569 | Not Available | Negative | 1433312 - 1433770 | 17801.1 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488094_102570 | Not Available | Positive | 1434147 - 1434614 | 17119.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
