Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102551 | Not Available | Negative | 1417627 - 1418028 | 13893.7 |
| beta-alanine--pyruvate transaminase | SAMN04488094_102552 | Not Available | Negative | 1418041 - 1419366 | 47894.8 |
| transcriptional regulator, tetr family | SAMN04488094_102553 | Not Available | Positive | 1419542 - 1420180 | 24087.9 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_102554 | Not Available | Positive | 1420267 - 1421661 | 47932.5 |
| dihydrouracil dehydrogenase (nad+) /dihydropyrimidine dehydrogenase (nadp+) | SAMN04488094_102555 | Not Available | Negative | 1421700 - 1423004 | 47016.2 |
| glutamate synthase (nadph/nadh) small chain | SAMN04488094_102556 | Not Available | Negative | 1423018 - 1424379 | 48248.1 |
| biotin carboxyl carrier protein | SAMN04488094_102557 | Not Available | Positive | 1424698 - 1425192 | 17167.7 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04488094_102558 | Not Available | Positive | 1425189 - 1426538 | 48901.5 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN04488094_102559 | Not Available | Positive | 1426609 - 1427244 | 23328.1 |
| hypothetical protein | SAMN04488094_102560 | Not Available | Negative | 1427208 - 1427561 | 12981.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
