Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN04488094_102521 | Not Available | Negative | 1384294 - 1385775 | 53138.3 |
| two component transcriptional regulator, luxr family | SAMN04488094_102522 | Not Available | Negative | 1385890 - 1386504 | 22081.6 |
| polymer biosynthesis protein, wecb/taga/cpsf family | SAMN04488094_102523 | Not Available | Positive | 1386778 - 1388187 | 50759.1 |
| hypothetical protein | SAMN04488094_102524 | Not Available | Positive | 1388317 - 1388841 | 18477.8 |
| pas domain s-box-containing protein | SAMN04488094_102525 | Not Available | Positive | 1388863 - 1391472 | 94525.6 |
| heat repeat-containing protein | SAMN04488094_102526 | Not Available | Negative | 1391525 - 1393480 | 70883.3 |
| Trna-thr | Not Available | Not Available | Positive | 1393825 - 1393900 | Not Available |
| uncharacterized conserved protein, upf0335 family | SAMN04488094_102528 | Not Available | Negative | 1394169 - 1394450 | 10576.6 |
| hypothetical protein | SAMN04488094_102529 | Not Available | Positive | 1394589 - 1394804 | 7303.44 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN04488094_102530 | Not Available | Negative | 1394811 - 1396847 | 69202.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
