Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102501 | Not Available | Negative | 1362240 - 1362413 | 6058.36 |
| branched-chain amino acid transport system substrate-binding protein | SAMN04488094_102502 | Not Available | Positive | 1362775 - 1363911 | 40583.6 |
| two-component response regulator, amir/nast family, consists of rec and rna-binding antiterminator (antar) domains | SAMN04488094_102503 | Not Available | Positive | 1363908 - 1364501 | 21276.6 |
| peptide/nickel transport system permease protein | SAMN04488094_102504 | Not Available | Positive | 1364492 - 1365397 | 32785.0 |
| peptide/nickel transport system permease protein | SAMN04488094_102505 | Not Available | Positive | 1365397 - 1366317 | 33408.3 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_102506 | Not Available | Positive | 1366448 - 1368073 | 59407.7 |
| acetamidase/formamidase | SAMN04488094_102507 | Not Available | Positive | 1368063 - 1369007 | 33541.9 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_102508 | Not Available | Positive | 1369004 - 1370779 | 64180.0 |
| nicotinamidase-related amidase | SAMN04488094_102509 | Not Available | Positive | 1370808 - 1371479 | 25084.8 |
| alanine or glycine:cation symporter, agcs family | SAMN04488094_102510 | Not Available | Positive | 1371667 - 1373040 | 47255.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
