Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tape-measure protein | SAMN04488094_10530 | Not Available | Positive | 2151232 - 2153250 | 70175.6 |
| Tail protein | SAMN04488094_10531 | Not Available | Positive | 2153250 - 2153876 | 22649.3 |
| Hypothetical protein | SAMN04488094_10532 | Not Available | Positive | 2153873 - 2154232 | 11916.5 |
| Putative endolysin/autolysin | SAMN04488094_10533 | Not Available | Positive | 2154363 - 2154986 | 22895.6 |
| hypothetical protein | SAMN04488094_10534 | Not Available | Positive | 2154989 - 2155213 | 7693.55 |
| Minor tail protein | SAMN04488094_10535 | Not Available | Positive | 2155218 - 2156102 | 31084.3 |
| Gta-like protein | SAMN04488094_10536 | Not Available | Positive | 2156099 - 2156599 | 18019.6 |
| Tail protein | SAMN04488094_10537 | Not Available | Positive | 2156606 - 2160505 | 140316.0 |
| Ribonuclease iii | SAMN04488094_10538 | Not Available | Positive | 2160518 - 2161594 | 38300.9 |
| Putative dna methylase | SAMN04488094_10539 | Not Available | Positive | 2161752 - 2162831 | 38553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
