Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly accessory protein | SAMN04488094_102471 | Not Available | Positive | 1332078 - 1332401 | 11336.4 |
| hypothetical protein | SAMN04488094_102472 | Not Available | Negative | 1332432 - 1332914 | 16174.3 |
| cyclic pyranopterin monophosphate synthase subunit moaa | SAMN04488094_102473 | Not Available | Positive | 1333002 - 1334021 | 38517.4 |
| hypothetical protein | SAMN04488094_102474 | Not Available | Negative | 1334185 - 1334985 | 29519.3 |
| hippurate hydrolase | SAMN04488094_102475 | Not Available | Negative | 1335076 - 1336239 | 41461.3 |
| uncharacterized membrane-anchored protein | SAMN04488094_102476 | Not Available | Negative | 1336339 - 1337694 | 50558.1 |
| ornithine decarboxylase | SAMN04488094_102477 | Not Available | Negative | 1337780 - 1338955 | 42369.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488094_102478 | Not Available | Positive | 1339289 - 1339717 | 15388.3 |
| nad(p) transhydrogenase subunit beta | SAMN04488094_102479 | Not Available | Negative | 1339797 - 1341230 | 49954.5 |
| nad(p) transhydrogenase subunit alpha | SAMN04488094_102480 | Not Available | Negative | 1341244 - 1342893 | 58944.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
