Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tade-like protein | SAMN04488094_102461 | Not Available | Negative | 1319240 - 1319776 | 19317.3 |
| putative flp pilus-assembly tade/g-like | SAMN04488094_102462 | Not Available | Negative | 1319782 - 1321239 | 50851.5 |
| pilus assembly protein cpab | SAMN04488094_102463 | Not Available | Negative | 1321264 - 1322061 | 28488.1 |
| hypothetical protein | SAMN04488094_102464 | Not Available | Negative | 1322214 - 1322408 | 6687.25 |
| 5-deoxyglucuronate isomerase | SAMN04488094_102465 | Not Available | Negative | 1322823 - 1323629 | 29947.2 |
| 2-keto-myo-inositol dehydratase | SAMN04488094_102466 | Not Available | Negative | 1323747 - 1324640 | 32403.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | SAMN04488094_102467 | Not Available | Negative | 1324711 - 1326537 | 65565.8 |
| 5-dehydro-2-deoxygluconokinase | SAMN04488094_102468 | Not Available | Negative | 1326613 - 1328532 | 70149.1 |
| transcriptional regulator, rpir family | SAMN04488094_102469 | Not Available | Negative | 1329734 - 1330552 | 29373.3 |
| dgtpase | SAMN04488094_102470 | Not Available | Negative | 1330846 - 1331985 | 42428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
