Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1310290 - 1310373 | Not Available |
| sensor histidine kinase inhibitor, kipi family | SAMN04488094_102452 | Not Available | Positive | 1310537 - 1311283 | 26819.8 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN04488094_102453 | Not Available | Positive | 1311280 - 1312332 | 36322.3 |
| prepilin peptidase cpaa | SAMN04488094_102454 | Not Available | Negative | 1312360 - 1312830 | 16278.2 |
| dna-binding transcriptional regulator, csgd family | SAMN04488094_102455 | Not Available | Negative | 1312837 - 1313673 | 30497.9 |
| tight adherence protein c | SAMN04488094_102456 | Not Available | Negative | 1313939 - 1314937 | 36032.1 |
| tight adherence protein b | SAMN04488094_102457 | Not Available | Negative | 1314947 - 1315918 | 35617.2 |
| pilus assembly protein cpaf | SAMN04488094_102458 | Not Available | Negative | 1315922 - 1317316 | 51267.9 |
| pilus assembly protein cpae | SAMN04488094_102459 | Not Available | Negative | 1317329 - 1318534 | 43406.4 |
| tade-like protein | SAMN04488094_102460 | Not Available | Negative | 1318554 - 1319243 | 24578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
