Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1304421 - 1304495 | Not Available |
| imidazoleglycerol-phosphate dehydratase | SAMN04488094_102442 | Not Available | Positive | 1304617 - 1305204 | 21436.5 |
| glutamine amidotransferase | SAMN04488094_102443 | Not Available | Positive | 1305206 - 1305847 | 22618.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04488094_102444 | Not Available | Positive | 1305971 - 1306705 | 25462.8 |
| protein of unknown function duf302 | SAMN04488094_102445 | Not Available | Negative | 1306680 - 1307123 | 14812.0 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN04488094_102446 | Not Available | Positive | 1307231 - 1307992 | 26569.8 |
| phosphoribosyl-atp pyrophosphatase | SAMN04488094_102447 | Not Available | Positive | 1308061 - 1308375 | 11251.4 |
| hypothetical protein | SAMN04488094_102448 | Not Available | Negative | 1308372 - 1308818 | 16274.5 |
| hypothetical protein | SAMN04488094_102449 | Not Available | Negative | 1309016 - 1309312 | 10771.2 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04488094_102450 | Not Available | Negative | 1309325 - 1310101 | 27409.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
