Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsw | SAMN04488094_102421 | Not Available | Negative | 1281101 - 1282267 | 41645.8 |
| hypothetical protein | SAMN04488094_102422 | Not Available | Positive | 1282526 - 1283212 | 25804.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04488094_102423 | Not Available | Negative | 1283227 - 1284633 | 48650.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04488094_102424 | Not Available | Negative | 1284714 - 1285796 | 38523.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04488094_102425 | Not Available | Negative | 1285810 - 1287258 | 50390.8 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04488094_102426 | Not Available | Negative | 1287255 - 1288778 | 52694.5 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04488094_102427 | Not Available | Negative | 1288841 - 1290625 | 64276.5 |
| hypothetical protein | SAMN04488094_102428 | Not Available | Negative | 1290622 - 1290978 | 13237.0 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04488094_102429 | Not Available | Negative | 1290975 - 1291985 | 36130.0 |
| mraz protein | SAMN04488094_102430 | Not Available | Negative | 1291989 - 1292456 | 17392.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
