Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | SAMN04488094_102411 | Not Available | Negative | 1270207 - 1271829 | 57316.5 |
| cell division protein ftsa | SAMN04488094_102412 | Not Available | Negative | 1272278 - 1273612 | 48229.9 |
| cell division protein ftsq | SAMN04488094_102413 | Not Available | Negative | 1273609 - 1274493 | 32973.0 |
| d-alanine-d-alanine ligase | SAMN04488094_102414 | Not Available | Negative | 1274481 - 1275395 | 32663.7 |
| udp-n-acetylmuramate dehydrogenase | SAMN04488094_102415 | Not Available | Negative | 1275490 - 1276428 | 33720.9 |
| hypothetical protein | SAMN04488094_102416 | Not Available | Positive | 1277354 - 1278001 | 22245.5 |
| protein of unknown function | SAMN04488094_102417 | Not Available | Negative | 1277941 - 1278234 | 10715.2 |
| protein of unknown function | SAMN04488094_102418 | Not Available | Negative | 1278231 - 1278509 | 10159.7 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN04488094_102419 | Not Available | Negative | 1278562 - 1279980 | 50478.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | SAMN04488094_102420 | Not Available | Negative | 1279977 - 1281101 | 38832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
