Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN04488094_102401 | Not Available | Negative | 1259394 - 1260944 | 56774.6 |
| phytochelatin synthase | SAMN04488094_102402 | Not Available | Negative | 1261077 - 1261784 | 25241.8 |
| cobaltochelatase cobs subunit | SAMN04488094_102403 | Not Available | Negative | 1261878 - 1262861 | 36752.7 |
| hypothetical protein | SAMN04488094_102404 | Not Available | Positive | 1263134 - 1263619 | 16303.5 |
| dnaj domain-containing protein | SAMN04488094_102405 | Not Available | Negative | 1263661 - 1264290 | 24360.2 |
| hypothetical protein | SAMN04488094_102406 | Not Available | Negative | 1264304 - 1264627 | 12072.5 |
| d-lactate dehydrogenase (cytochrome) | SAMN04488094_102407 | Not Available | Positive | 1264779 - 1266149 | 48331.5 |
| dna replication and repair protein recn | SAMN04488094_102408 | Not Available | Negative | 1266260 - 1267909 | 58735.7 |
| beta-barrel assembly machine subunit bamd | SAMN04488094_102409 | Not Available | Negative | 1268056 - 1268907 | 32140.6 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN04488094_102410 | Not Available | Negative | 1269037 - 1269957 | 32665.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
