Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lyse/rhtb family amino acid efflux pump | SAMN04488094_102391 | Not Available | Negative | 1247968 - 1248597 | 21158.3 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN04488094_102392 | Not Available | Negative | 1248594 - 1249058 | 16190.7 |
| transglycosylase slt domain-containing protein | SAMN04488094_102393 | Not Available | Negative | 1249205 - 1249888 | 24055.6 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN04488094_102394 | Not Available | Positive | 1250084 - 1251592 | 55660.3 |
| hypothetical protein | SAMN04488094_102395 | Not Available | Positive | 1251716 - 1252234 | 18121.0 |
| chloride channel protein, cic family | SAMN04488094_102396 | Not Available | Positive | 1252487 - 1254175 | 59046.4 |
| uncharacterized conserved protein, duf427 family | SAMN04488094_102397 | Not Available | Negative | 1254212 - 1254559 | 12673.9 |
| xaa-pro aminopeptidase | SAMN04488094_102398 | Not Available | Negative | 1254641 - 1256440 | 65273.4 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_102399 | Not Available | Negative | 1256533 - 1257303 | 27648.1 |
| cobaltochelatase cobt subunit | SAMN04488094_102400 | Not Available | Negative | 1257408 - 1259279 | 69381.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
