Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_10520 | Not Available | Positive | 2143940 - 2144149 | 7408.71 |
| Putative portal protein | SAMN04488094_10521 | Not Available | Positive | 2144146 - 2145693 | 56994.3 |
| Putative major head protein | SAMN04488094_10522 | Not Available | Positive | 2145698 - 2147746 | 74096.9 |
| Minor capsid protein | SAMN04488094_10523 | Not Available | Positive | 2147836 - 2148174 | 11038.7 |
| hypothetical protein | SAMN04488094_10524 | Not Available | Positive | 2148174 - 2148488 | 11170.2 |
| hypothetical protein | SAMN04488094_10525 | Not Available | Positive | 2148485 - 2149144 | 24423.9 |
| hypothetical protein | SAMN04488094_10526 | Not Available | Positive | 2149144 - 2149581 | 14920.9 |
| Major tail structural protein | SAMN04488094_10527 | Not Available | Positive | 2149604 - 2150557 | 33618.6 |
| hypothetical protein | SAMN04488094_10528 | Not Available | Positive | 2150566 - 2151021 | 16332.4 |
| hypothetical protein | SAMN04488094_10529 | Not Available | Positive | 2151033 - 2151239 | 7203.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
