Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | SAMN04488094_102361 | Not Available | Negative | 1215180 - 1216004 | 28867.0 |
| dihydroorotase | SAMN04488094_102362 | Not Available | Positive | 1216134 - 1217246 | 39708.7 |
| orotate phosphoribosyltransferase | SAMN04488094_102363 | Not Available | Positive | 1217372 - 1218046 | 24373.2 |
| replicative dna helicase | SAMN04488094_102364 | Not Available | Positive | 1218314 - 1219831 | 55057.4 |
| uncharacterized conserved protein | SAMN04488094_102365 | Not Available | Negative | 1219859 - 1220305 | 16114.7 |
| alanine racemase | SAMN04488094_102366 | Not Available | Positive | 1220516 - 1221568 | 36777.7 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488094_102367 | Not Available | Positive | 1221565 - 1222368 | 27487.1 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488094_102368 | Not Available | Positive | 1222365 - 1223111 | 26851.7 |
| lysm domain-containing protein | SAMN04488094_102369 | Not Available | Negative | 1223121 - 1224452 | 45154.4 |
| hypothetical protein | SAMN04488094_102370 | Not Available | Positive | 1224566 - 1225132 | 20374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
