Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_102351 | Not Available | Positive | 1206096 - 1206773 | 24423.8 |
| arginase | SAMN04488094_102352 | Not Available | Negative | 1206825 - 1207754 | 33020.5 |
| hypothetical protein | SAMN04488094_102353 | Not Available | Positive | 1208822 - 1209706 | 33394.7 |
| urease accessory protein | SAMN04488094_102354 | Not Available | Negative | 1209713 - 1210327 | 21499.7 |
| urease accessory protein | SAMN04488094_102355 | Not Available | Negative | 1210356 - 1211045 | 23900.7 |
| urease accessory protein | SAMN04488094_102356 | Not Available | Negative | 1210987 - 1211484 | 17816.9 |
| urease subunit alpha | SAMN04488094_102357 | Not Available | Negative | 1211615 - 1213324 | 60562.6 |
| meckel syndrome type 1 protein | SAMN04488094_102358 | Not Available | Negative | 1213740 - 1214435 | 23323.9 |
| urease subunit beta | SAMN04488094_102359 | Not Available | Negative | 1214492 - 1214797 | 10699.7 |
| urease subunit gamma | SAMN04488094_102360 | Not Available | Negative | 1214869 - 1215171 | 10899.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
