Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01139 | SAMN04488094_102330 | Not Available | Negative | 1187772 - 1188902 | Not Available |
| ferritin-like metal-binding protein ycie | SAMN04488094_102331 | Not Available | Negative | 1188965 - 1189447 | 18325.7 |
| fes assembly suf system protein | SAMN04488094_102332 | Not Available | Positive | 1189656 - 1190018 | 13212.8 |
| hypothetical protein | SAMN04488094_102333 | Not Available | Positive | 1190117 - 1190737 | 21501.5 |
| protein of unknown function | SAMN04488094_102334 | Not Available | Positive | 1190809 - 1191546 | 26166.4 |
| iron-sulfur cluster assembly protein | SAMN04488094_102335 | Not Available | Positive | 1191600 - 1191971 | 13319.1 |
| hypothetical protein | SAMN04488094_102336 | Not Available | Negative | 1191949 - 1192167 | 8743.68 |
| transcriptional regulator, lysr family | SAMN04488094_102337 | Not Available | Positive | 1192260 - 1193108 | 31384.4 |
| triosephosphate isomerase | SAMN04488094_102338 | Not Available | Positive | 1193210 - 1193959 | 25502.2 |
| iron(iii) transport system permease protein | SAMN04488094_102339 | Not Available | Positive | 1193973 - 1195661 | 59721.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
