Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | SAMN04488094_102320 | Not Available | Negative | 1177606 - 1179021 | 51193.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN04488094_102321 | Not Available | Negative | 1179083 - 1179736 | 23005.7 |
| luxr family transcriptional regulator | SAMN04488094_102322 | Not Available | Negative | 1180156 - 1180899 | 27659.0 |
| probable phosphoglycerate mutase | SAMN04488094_102323 | Not Available | Negative | 1180949 - 1181518 | 20842.0 |
| Trna-val | Not Available | Not Available | Positive | 1181551 - 1181625 | Not Available |
| hypothetical protein | SAMN04488094_102325 | Not Available | Negative | 1181730 - 1181972 | 8534.34 |
| Trna-val | Not Available | Not Available | Positive | 1182114 - 1182188 | Not Available |
| elwxxdgt repeat-containing protein | SAMN04488094_102327 | Not Available | Negative | 1182303 - 1183808 | 52288.2 |
| atp-dependent lon protease | SAMN04488094_102328 | Not Available | Negative | 1184139 - 1186556 | 89533.3 |
| glycosyltransferase, gt2 family | SAMN04488094_102329 | Not Available | Positive | 1186807 - 1187766 | 35514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
