Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan glycosyltransferase | SAMN04488094_102300 | Not Available | Positive | 1156683 - 1158602 | 69985.9 |
| cell elongation-specific peptidoglycan biosynthesis regulator roda | SAMN04488094_102301 | Not Available | Positive | 1158599 - 1159747 | 41911.4 |
| glyoxylate/hydroxypyruvate reductase a | SAMN04488094_102302 | Not Available | Positive | 1159744 - 1160679 | 33474.0 |
| alpha/beta hydrolase family protein | SAMN04488094_102303 | Not Available | Positive | 1160730 - 1161581 | 30878.8 |
| d-aminopeptidase | SAMN04488094_102304 | Not Available | Negative | 1161598 - 1162593 | 32934.1 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488094_102305 | Not Available | Negative | 1162609 - 1163349 | 25477.7 |
| aldehyde dehydrogenase (nad+) | SAMN04488094_102306 | Not Available | Negative | 1163517 - 1164968 | 50927.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488094_102307 | Not Available | Negative | 1165039 - 1165749 | 25439.4 |
| esterase/lipase | SAMN04488094_102308 | Not Available | Negative | 1165880 - 1166857 | 34638.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488094_102309 | Not Available | Negative | 1166854 - 1167615 | 27168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
