Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase | SAMN04488094_102290 | Not Available | Negative | 1144937 - 1146613 | 61957.1 |
| uncharacterized conserved protein | SAMN04488094_102291 | Not Available | Positive | 1146783 - 1148363 | 55642.9 |
| glutathione s-transferase | SAMN04488094_102292 | Not Available | Positive | 1148490 - 1149284 | 30269.2 |
| 2-isopropylmalate synthase | SAMN04488094_102293 | Not Available | Positive | 1149496 - 1151061 | 57296.0 |
| hypothetical protein | SAMN04488094_102294 | Not Available | Negative | 1151036 - 1151236 | 7449.95 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488094_102295 | Not Available | Positive | 1151397 - 1152308 | 34403.0 |
| small conductance mechanosensitive channel | SAMN04488094_102296 | Not Available | Negative | 1152342 - 1153856 | 53256.2 |
| rod shape-determining protein mreb | SAMN04488094_102297 | Not Available | Positive | 1154132 - 1155169 | 36579.4 |
| rod shape-determining protein mrec | SAMN04488094_102298 | Not Available | Positive | 1155216 - 1156154 | 33988.8 |
| rod shape-determining protein mred | SAMN04488094_102299 | Not Available | Positive | 1156147 - 1156686 | 19186.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
