Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyethylthiazole kinase | SAMN04488094_102279 | Not Available | Negative | 1134809 - 1135597 | 26118.1 |
| hypothetical protein | SAMN04488094_102281 | Not Available | Positive | 1135839 - 1136378 | 19177.3 |
| malonyl-coa/methylmalonyl-coa synthetase | SAMN04488094_102282 | Not Available | Negative | 1136440 - 1137954 | 55203.1 |
| glutamyl-trna synthetase | SAMN04488094_102283 | Not Available | Negative | 1138411 - 1139730 | 48784.9 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN04488094_102284 | Not Available | Positive | 1139811 - 1140215 | 15564.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488094_102285 | Not Available | Positive | 1140344 - 1141264 | 33081.1 |
| 6-phosphofructokinase 2 | SAMN04488094_102286 | Not Available | Positive | 1141472 - 1142419 | 32814.0 |
| arsenate reductase | SAMN04488094_102287 | Not Available | Positive | 1142423 - 1142851 | 15346.7 |
| hypothetical protein | SAMN04488094_102288 | Not Available | Negative | 1142888 - 1143166 | 10147.3 |
| magnesium transporter | SAMN04488094_102289 | Not Available | Negative | 1143404 - 1144810 | 50598.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
