Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN04488094_102269 | Not Available | Negative | 1124602 - 1125834 | 43867.9 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN04488094_102270 | Not Available | Negative | 1125926 - 1127884 | 70653.6 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN04488094_102271 | Not Available | Negative | 1127950 - 1129227 | 46327.5 |
| putative holin-x, holin superfamily iii | SAMN04488094_102272 | Not Available | Negative | 1129609 - 1130073 | 16460.7 |
| hypothetical protein | SAMN04488094_102273 | Not Available | Negative | 1130084 - 1130371 | 10077.4 |
| putative hydroxymethylpyrimidine transport system permease protein | SAMN04488094_102274 | Not Available | Negative | 1130945 - 1131682 | 25648.5 |
| putative hydroxymethylpyrimidine transport system atp-binding protein | SAMN04488094_102275 | Not Available | Negative | 1131679 - 1132407 | 25883.3 |
| putative hydroxymethylpyrimidine transport system substrate-binding protein | SAMN04488094_102276 | Not Available | Negative | 1132404 - 1133339 | 33884.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN04488094_102277 | Not Available | Negative | 1133362 - 1134177 | 27626.1 |
| thiamine-phosphate pyrophosphorylase | SAMN04488094_102278 | Not Available | Negative | 1134174 - 1134812 | 21390.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
