Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102249 | Not Available | Positive | 1105587 - 1106522 | 32995.9 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_102250 | Not Available | Negative | 1106566 - 1107477 | 33241.3 |
| putative spermidine/putrescine transport system permease protein | SAMN04488094_102251 | Not Available | Negative | 1107566 - 1108882 | 48120.0 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04488094_102252 | Not Available | Negative | 1108982 - 1110055 | 38569.2 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04488094_102253 | Not Available | Negative | 1110122 - 1111222 | 41068.6 |
| zinc transport system substrate-binding protein | SAMN04488094_102254 | Not Available | Negative | 1111458 - 1112474 | 35714.2 |
| fur family transcriptional regulator, zinc uptake regulator | SAMN04488094_102255 | Not Available | Positive | 1112548 - 1113051 | 18066.6 |
| zinc transport system atp-binding protein | SAMN04488094_102256 | Not Available | Positive | 1113048 - 1113818 | 27689.6 |
| zinc transport system permease protein | SAMN04488094_102257 | Not Available | Positive | 1113818 - 1114612 | 26457.2 |
| fructuronate reductase | SAMN04488094_102258 | Not Available | Negative | 1114692 - 1116149 | 52510.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
