Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_102229 | Not Available | Positive | 1083790 - 1087119 | 122410.0 |
| dna helicase-4 | SAMN04488094_102230 | Not Available | Positive | 1087393 - 1090164 | 103256.0 |
| c1q domain-containing protein | SAMN04488094_102231 | Not Available | Negative | 1090251 - 1091327 | 38111.6 |
| putative phage tail protein | SAMN04488094_102232 | Not Available | Negative | 1091337 - 1095305 | 141714.0 |
| putative phage cell wall peptidase, nlpc/p60 family | SAMN04488094_102233 | Not Available | Negative | 1095315 - 1095809 | 18185.0 |
| phage conserved hypothetical protein br0599 | SAMN04488094_102234 | Not Available | Negative | 1095806 - 1096690 | 31582.8 |
| hypothetical protein | SAMN04488094_102235 | Not Available | Negative | 1096687 - 1096929 | 8303.77 |
| hypothetical protein | SAMN04488094_102236 | Not Available | Negative | 1097134 - 1097364 | 7987.89 |
| lysozyme | SAMN04488094_102237 | Not Available | Negative | 1097369 - 1098028 | 24312.2 |
| hypothetical protein | SAMN04488094_102238 | Not Available | Negative | 1098033 - 1098164 | 4812.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
