Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_102219 | Not Available | Positive | 1070048 - 1070545 | 18161.8 |
| site-specific dna recombinase | SAMN04488094_102220 | Not Available | Positive | 1070542 - 1071867 | 49535.6 |
| hypothetical protein | SAMN04488094_102221 | Not Available | Positive | 1071867 - 1072250 | 14413.6 |
| protein of unknown function | SAMN04488094_102222 | Not Available | Negative | 1072254 - 1073090 | 31614.3 |
| helix-turn-helix domain-containing protein | SAMN04488094_102223 | Not Available | Positive | 1073727 - 1073930 | 7753.24 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04488094_102224 | Not Available | Positive | 1074087 - 1074974 | 33699.7 |
| hypothetical protein | SAMN04488094_102225 | Not Available | Positive | 1075041 - 1076963 | 72356.1 |
| protein of unknown function | SAMN04488094_102226 | Not Available | Positive | 1077047 - 1080556 | 133197.0 |
| asch domain-containing protein | SAMN04488094_102227 | Not Available | Positive | 1080553 - 1080960 | 14889.1 |
| putative dna methylase | SAMN04488094_102228 | Not Available | Positive | 1080957 - 1083776 | 104127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
